Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim43bP86448 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim43bP86448 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim43bP86448 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim43bP86448 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trim43bP86448 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim43bP86448 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43bP86448 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43bP86448 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.72■□□□□ 0.59
Trim43bP86448 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim43bP86448 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim43bP86448 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim43bP86448 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim43bP86448 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim43bP86448 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim43bP86448 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.71■□□□□ 0.59
Trim43bP86448 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim43bP86448 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trim43bP86448 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim43bP86448 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim43bP86448 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim43bP86448 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim43bP86448 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Trim43bP86448 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim43bP86448 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim43bP86448 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim43bP86448 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Trim43bP86448 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.68■□□□□ 0.58
Trim43bP86448 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43bP86448 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.68■□□□□ 0.58
Trim43bP86448 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.68■□□□□ 0.58
Trim43bP86448 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43bP86448 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trim43bP86448 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
Trim43bP86448 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.68■□□□□ 0.58
Trim43bP86448 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim43bP86448 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trim43bP86448 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43bP86448 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Trim43bP86448 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim43bP86448 Gm37179-201ENSMUST00000194862 823 ntBASIC18.67■□□□□ 0.58
Trim43bP86448 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.67■□□□□ 0.58
Trim43bP86448 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim43bP86448 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms