Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Msh6P54276 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.3■■□□□ 1.32
Msh6P54276 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC23.3■■□□□ 1.32
Msh6P54276 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC23.3■■□□□ 1.32
Msh6P54276 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Msh6P54276 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Msh6P54276 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.29■■□□□ 1.32
Msh6P54276 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC23.29■■□□□ 1.32
Msh6P54276 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.29■■□□□ 1.32
Msh6P54276 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.29■■□□□ 1.32
Msh6P54276 Gm43183-201ENSMUST00000200632 547 ntBASIC23.29■■□□□ 1.32
Msh6P54276 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.29■■□□□ 1.32
Msh6P54276 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Msh6P54276 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Msh6P54276 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.29■■□□□ 1.32
Msh6P54276 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Msh6P54276 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.28■■□□□ 1.32
Msh6P54276 Mtag2-201ENSMUST00000058665 714 ntBASIC23.28■■□□□ 1.32
Msh6P54276 Zfp783-201ENSMUST00000095946 670 ntBASIC23.28■■□□□ 1.32
Msh6P54276 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Msh6P54276 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.28■■□□□ 1.32
Msh6P54276 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Msh6P54276 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Msh6P54276 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Msh6P54276 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.27■■□□□ 1.32
Msh6P54276 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.27■■□□□ 1.32
Msh6P54276 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC23.27■■□□□ 1.32
Msh6P54276 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Msh6P54276 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Msh6P54276 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Msh6P54276 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC23.27■■□□□ 1.32
Msh6P54276 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Msh6P54276 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
Msh6P54276 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Msh6P54276 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Msh6P54276 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Msh6P54276 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Msh6P54276 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Msh6P54276 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Msh6P54276 Gm45906-201ENSMUST00000208911 1430 ntBASIC23.26■■□□□ 1.31
Msh6P54276 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Msh6P54276 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Msh6P54276 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.25■■□□□ 1.31
Msh6P54276 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Msh6P54276 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Msh6P54276 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.25■■□□□ 1.31
Msh6P54276 Gm30025-201ENSMUST00000218555 728 ntBASIC23.25■■□□□ 1.31
Msh6P54276 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.25■■□□□ 1.31
Msh6P54276 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msh6P54276 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Msh6P54276 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Msh6P54276 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Msh6P54276 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.24■■□□□ 1.31
Msh6P54276 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Msh6P54276 Gm13559-201ENSMUST00000120476 863 ntBASIC23.24■■□□□ 1.31
Msh6P54276 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Msh6P54276 Gm10138-203ENSMUST00000206952 366 ntBASIC23.24■■□□□ 1.31
Msh6P54276 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Gm18025-201ENSMUST00000221733 862 ntBASIC23.23■■□□□ 1.31
Msh6P54276 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msh6P54276 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.22■■□□□ 1.31
Msh6P54276 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Msh6P54276 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC23.22■■□□□ 1.31
Msh6P54276 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Msh6P54276 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.22■■□□□ 1.31
Msh6P54276 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms