Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Mir7075-201ENSMUST00000184187 82 ntBASIC18.36■□□□□ 0.53
RxrbP28704 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.36■□□□□ 0.53
RxrbP28704 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.36■□□□□ 0.53
RxrbP28704 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.36■□□□□ 0.53
RxrbP28704 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RxrbP28704 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RxrbP28704 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RxrbP28704 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Smad6-203ENSMUST00000179458 273 ntBASIC18.35■□□□□ 0.53
RxrbP28704 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.35■□□□□ 0.53
RxrbP28704 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.35■□□□□ 0.53
RxrbP28704 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.35■□□□□ 0.53
RxrbP28704 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RxrbP28704 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RxrbP28704 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RxrbP28704 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.34■□□□□ 0.53
RxrbP28704 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.34■□□□□ 0.53
RxrbP28704 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RxrbP28704 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RxrbP28704 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RxrbP28704 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RxrbP28704 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RxrbP28704 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RxrbP28704 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Gm11421-201ENSMUST00000122124 294 ntBASIC18.33■□□□□ 0.52
RxrbP28704 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RxrbP28704 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.32■□□□□ 0.52
RxrbP28704 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RxrbP28704 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.32■□□□□ 0.52
RxrbP28704 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.32■□□□□ 0.52
RxrbP28704 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RxrbP28704 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RxrbP28704 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RxrbP28704 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RxrbP28704 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RxrbP28704 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RxrbP28704 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.31■□□□□ 0.52
RxrbP28704 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RxrbP28704 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RxrbP28704 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RxrbP28704 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Gm8493-201ENSMUST00000196881 489 ntBASIC18.3■□□□□ 0.52
RxrbP28704 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.3■□□□□ 0.52
RxrbP28704 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RxrbP28704 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms