Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmgn1P18608 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Hmgn1P18608 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hmgn1P18608 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgn1P18608 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Hmgn1P18608 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Hmgn1P18608 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.71■□□□□ 0.27
Hmgn1P18608 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgn1P18608 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn1P18608 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn1P18608 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.71■□□□□ 0.26
Hmgn1P18608 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn1P18608 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn1P18608 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Hmgn1P18608 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Tgds-204ENSMUST00000228543 1594 ntBASIC16.7■□□□□ 0.26
Hmgn1P18608 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Mir7075-201ENSMUST00000184187 82 ntBASIC16.7■□□□□ 0.26
Hmgn1P18608 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.7■□□□□ 0.26
Hmgn1P18608 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hmgn1P18608 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.69■□□□□ 0.26
Hmgn1P18608 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.69■□□□□ 0.26
Hmgn1P18608 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hmgn1P18608 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Hmgn1P18608 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hmgn1P18608 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.68■□□□□ 0.26
Hmgn1P18608 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Gm43173-201ENSMUST00000202246 593 ntBASIC16.68■□□□□ 0.26
Hmgn1P18608 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hmgn1P18608 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hmgn1P18608 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.68■□□□□ 0.26
Hmgn1P18608 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Hmgn1P18608 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.67■□□□□ 0.26
Hmgn1P18608 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.67■□□□□ 0.26
Hmgn1P18608 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.67■□□□□ 0.26
Hmgn1P18608 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.67■□□□□ 0.26
Hmgn1P18608 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hmgn1P18608 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hmgn1P18608 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms