Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H3f3cP02301 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
H3f3cP02301 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H3f3cP02301 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
H3f3cP02301 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
H3f3cP02301 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
H3f3cP02301 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
H3f3cP02301 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.64■□□□□ 0.09
H3f3cP02301 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.64■□□□□ 0.09
H3f3cP02301 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.64■□□□□ 0.09
H3f3cP02301 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.64■□□□□ 0.09
H3f3cP02301 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.64■□□□□ 0.09
H3f3cP02301 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.64■□□□□ 0.09
H3f3cP02301 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H3f3cP02301 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
H3f3cP02301 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
H3f3cP02301 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.63■□□□□ 0.09
H3f3cP02301 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
H3f3cP02301 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
H3f3cP02301 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
H3f3cP02301 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.62■□□□□ 0.09
H3f3cP02301 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
H3f3cP02301 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.62■□□□□ 0.09
H3f3cP02301 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.62■□□□□ 0.09
H3f3cP02301 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.62■□□□□ 0.09
H3f3cP02301 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
H3f3cP02301 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
H3f3cP02301 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.62■□□□□ 0.09
H3f3cP02301 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.61■□□□□ 0.09
H3f3cP02301 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.61■□□□□ 0.09
H3f3cP02301 Rarb-207ENSMUST00000225921 2756 ntBASIC15.61■□□□□ 0.09
H3f3cP02301 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
H3f3cP02301 Mir5133-201ENSMUST00000174955 77 ntBASIC15.61■□□□□ 0.09
H3f3cP02301 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.61■□□□□ 0.09
H3f3cP02301 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.61■□□□□ 0.09
H3f3cP02301 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
H3f3cP02301 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
H3f3cP02301 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms