Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
IghmP01872 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IghmP01872 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IghmP01872 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IghmP01872 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.1■□□□□ 0.33
IghmP01872 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IghmP01872 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Nespas-201ENSMUST00000143738 1083 ntBASIC17.1■□□□□ 0.33
IghmP01872 Gm22325-201ENSMUST00000158904 308 ntBASIC17.1■□□□□ 0.33
IghmP01872 Gm10033-202ENSMUST00000211874 928 ntBASIC17.1■□□□□ 0.33
IghmP01872 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
IghmP01872 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.1■□□□□ 0.33
IghmP01872 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IghmP01872 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IghmP01872 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IghmP01872 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.09■□□□□ 0.33
IghmP01872 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IghmP01872 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
IghmP01872 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IghmP01872 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IghmP01872 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IghmP01872 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IghmP01872 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IghmP01872 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
IghmP01872 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IghmP01872 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.08■□□□□ 0.33
IghmP01872 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IghmP01872 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
IghmP01872 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.08■□□□□ 0.32
IghmP01872 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
IghmP01872 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IghmP01872 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IghmP01872 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IghmP01872 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.07■□□□□ 0.32
IghmP01872 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IghmP01872 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
IghmP01872 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.06■□□□□ 0.32
IghmP01872 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
IghmP01872 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.06■□□□□ 0.32
IghmP01872 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IghmP01872 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
IghmP01872 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
IghmP01872 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.05■□□□□ 0.32
IghmP01872 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IghmP01872 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IghmP01872 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms