Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Atp9aO70228 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Atp9aO70228 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.27■□□□□ 0.84
Atp9aO70228 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.27■□□□□ 0.84
Atp9aO70228 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Atp9aO70228 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Atp9aO70228 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Atp9aO70228 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Gm15378-201ENSMUST00000121894 207 ntBASIC20.26■□□□□ 0.83
Atp9aO70228 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.26■□□□□ 0.83
Atp9aO70228 Gm38285-201ENSMUST00000192928 922 ntBASIC20.26■□□□□ 0.83
Atp9aO70228 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.26■□□□□ 0.83
Atp9aO70228 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Atp9aO70228 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atp9aO70228 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp9aO70228 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.25■□□□□ 0.83
Atp9aO70228 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atp9aO70228 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.25■□□□□ 0.83
Atp9aO70228 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.24■□□□□ 0.83
Atp9aO70228 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.24■□□□□ 0.83
Atp9aO70228 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atp9aO70228 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
Atp9aO70228 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp9aO70228 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp9aO70228 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.23■□□□□ 0.83
Atp9aO70228 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Atp9aO70228 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp9aO70228 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.23■□□□□ 0.83
Atp9aO70228 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atp9aO70228 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.22■□□□□ 0.83
Atp9aO70228 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atp9aO70228 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.22■□□□□ 0.83
Atp9aO70228 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atp9aO70228 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.22■□□□□ 0.83
Atp9aO70228 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.21■□□□□ 0.83
Atp9aO70228 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Atp9aO70228 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.21■□□□□ 0.83
Atp9aO70228 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Atp9aO70228 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atp9aO70228 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Atp9aO70228 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.2■□□□□ 0.82
Atp9aO70228 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.2■□□□□ 0.82
Atp9aO70228 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Atp9aO70228 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Atp9aO70228 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Atp9aO70228 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atp9aO70228 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atp9aO70228 Golph3-205ENSMUST00000228671 2842 ntBASIC20.19■□□□□ 0.82
Atp9aO70228 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms