Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pdlim3O70209 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdlim3O70209 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim3O70209 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim3O70209 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.54■□□□□ 0.24
Pdlim3O70209 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pdlim3O70209 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Gm43173-201ENSMUST00000202246 593 ntBASIC16.54■□□□□ 0.24
Pdlim3O70209 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.54■□□□□ 0.24
Pdlim3O70209 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pdlim3O70209 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pdlim3O70209 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.53■□□□□ 0.24
Pdlim3O70209 Gm8493-201ENSMUST00000196881 489 ntBASIC16.53■□□□□ 0.24
Pdlim3O70209 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.53■□□□□ 0.24
Pdlim3O70209 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pdlim3O70209 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.52■□□□□ 0.24
Pdlim3O70209 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.52■□□□□ 0.24
Pdlim3O70209 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.52■□□□□ 0.24
Pdlim3O70209 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Pdlim3O70209 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.52■□□□□ 0.24
Pdlim3O70209 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Pdlim3O70209 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pdlim3O70209 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.52■□□□□ 0.23
Pdlim3O70209 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pdlim3O70209 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pdlim3O70209 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pdlim3O70209 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.51■□□□□ 0.23
Pdlim3O70209 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pdlim3O70209 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pdlim3O70209 Gm38205-201ENSMUST00000192243 258 ntBASIC16.51■□□□□ 0.23
Pdlim3O70209 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Pdlim3O70209 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.51■□□□□ 0.23
Pdlim3O70209 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pdlim3O70209 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pdlim3O70209 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pdlim3O70209 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms