Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pja1O55176 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.31■□□□□ 0.68
Pja1O55176 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.31■□□□□ 0.68
Pja1O55176 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pja1O55176 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.3■□□□□ 0.68
Pja1O55176 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pja1O55176 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pja1O55176 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
Pja1O55176 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pja1O55176 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Pja1O55176 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pja1O55176 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.29■□□□□ 0.68
Pja1O55176 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pja1O55176 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pja1O55176 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pja1O55176 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pja1O55176 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.28■□□□□ 0.68
Pja1O55176 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.28■□□□□ 0.68
Pja1O55176 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pja1O55176 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pja1O55176 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Pja1O55176 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.27■□□□□ 0.68
Pja1O55176 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pja1O55176 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.27■□□□□ 0.68
Pja1O55176 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.27■□□□□ 0.68
Pja1O55176 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pja1O55176 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pja1O55176 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.26■□□□□ 0.67
Pja1O55176 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.26■□□□□ 0.67
Pja1O55176 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.26■□□□□ 0.67
Pja1O55176 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pja1O55176 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.26■□□□□ 0.67
Pja1O55176 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pja1O55176 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pja1O55176 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pja1O55176 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pja1O55176 Reep4-203ENSMUST00000226563 1444 ntBASIC19.25■□□□□ 0.67
Pja1O55176 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pja1O55176 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pja1O55176 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Pja1O55176 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.25■□□□□ 0.67
Pja1O55176 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pja1O55176 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms