Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TLR4O00206 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.68■□□□□ 0.9
TLR4O00206 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TLR4O00206 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.67■□□□□ 0.9
TLR4O00206 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TLR4O00206 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.67■□□□□ 0.9
TLR4O00206 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TLR4O00206 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.67■□□□□ 0.9
TLR4O00206 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TLR4O00206 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.67■□□□□ 0.9
TLR4O00206 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR4O00206 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TLR4O00206 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.66■□□□□ 0.9
TLR4O00206 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.66■□□□□ 0.9
TLR4O00206 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.66■□□□□ 0.9
TLR4O00206 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.66■□□□□ 0.9
TLR4O00206 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
TLR4O00206 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.66■□□□□ 0.9
TLR4O00206 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR4O00206 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.66■□□□□ 0.9
TLR4O00206 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TLR4O00206 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.65■□□□□ 0.9
TLR4O00206 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TLR4O00206 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 DUSP5P2-201ENST00000426873 1033 ntBASIC20.65■□□□□ 0.9
TLR4O00206 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR4O00206 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
TLR4O00206 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.64■□□□□ 0.9
TLR4O00206 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TLR4O00206 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TLR4O00206 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
TLR4O00206 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
TLR4O00206 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TLR4O00206 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TLR4O00206 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TLR4O00206 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR4O00206 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TLR4O00206 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TLR4O00206 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.63■□□□□ 0.89
TLR4O00206 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
TLR4O00206 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
TLR4O00206 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.63■□□□□ 0.89
TLR4O00206 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR4O00206 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TLR4O00206 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TLR4O00206 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR4O00206 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR4O00206 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.62■□□□□ 0.89
TLR4O00206 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TLR4O00206 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 PRORSD1P-201ENST00000295112 541 ntBASIC20.62■□□□□ 0.89
TLR4O00206 LSM12P1-201ENST00000411836 588 ntBASIC20.62■□□□□ 0.89
TLR4O00206 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.62■□□□□ 0.89
TLR4O00206 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.62■□□□□ 0.89
TLR4O00206 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR4O00206 AC080038.3-201ENST00000623346 1952 ntBASIC20.62■□□□□ 0.89
TLR4O00206 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms