Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim34bJ3QNR8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Gm43183-201ENSMUST00000200632 547 ntBASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Gm18025-201ENSMUST00000221733 862 ntBASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trim34bJ3QNR8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Trim34bJ3QNR8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Gm42545-201ENSMUST00000202755 922 ntBASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim34bJ3QNR8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Mir5122-201ENSMUST00000175004 89 ntBASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Gm44544-201ENSMUST00000207052 1844 ntBASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim34bJ3QNR8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Gm15565-201ENSMUST00000118890 427 ntBASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim34bJ3QNR8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim34bJ3QNR8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms