Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3415J3QMS8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3415J3QMS8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3415J3QMS8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3415J3QMS8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3415J3QMS8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm3415J3QMS8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Gm5408-201ENSMUST00000197998 747 ntBASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3415J3QMS8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.43■□□□□ 0.7
Gm3415J3QMS8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3415J3QMS8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3415J3QMS8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.41■□□□□ 0.7
Gm3415J3QMS8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3415J3QMS8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3415J3QMS8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms