Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm3543D3Z235 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.47■□□□□ 0.23
Gm3543D3Z235 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.47■□□□□ 0.23
Gm3543D3Z235 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.47■□□□□ 0.23
Gm3543D3Z235 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Gm3543D3Z235 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.47■□□□□ 0.23
Gm3543D3Z235 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm3543D3Z235 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.46■□□□□ 0.23
Gm3543D3Z235 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Gm3543D3Z235 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm3543D3Z235 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.45■□□□□ 0.22
Gm3543D3Z235 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm3543D3Z235 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.44■□□□□ 0.22
Gm3543D3Z235 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.44■□□□□ 0.22
Gm3543D3Z235 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.43■□□□□ 0.22
Gm3543D3Z235 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm3543D3Z235 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms