Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm11127A7VMS2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm11127A7VMS2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Gm11127A7VMS2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm11127A7VMS2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm11127A7VMS2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm11127A7VMS2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Gm12821-201ENSMUST00000120022 600 ntBASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Gm8493-201ENSMUST00000196881 489 ntBASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm11127A7VMS2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms