Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 AA386476-201ENSMUST00000098781 1665 ntBASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm5921-201ENSMUST00000075898 882 ntBASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm43530-201ENSMUST00000195920 274 ntBASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm40881-201ENSMUST00000223397 166 ntBASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trdv2-1A0A0G2JGB9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trdv2-1A0A0G2JGB9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdv2-1A0A0G2JGB9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trdv2-1A0A0G2JGB9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms