Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav4-4-dv10A0A075B651 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm8493-201ENSMUST00000196881 489 ntBASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm38205-201ENSMUST00000192243 258 ntBASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Tgds-204ENSMUST00000228543 1594 ntBASIC14.22□□□□□ -0.13
Trav4-4-dv10A0A075B651 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav4-4-dv10A0A075B651 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms