Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6-7-dv9A0A075B639 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6-7-dv9A0A075B639 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm10033-202ENSMUST00000211874 928 ntBASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav6-7-dv9A0A075B639 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm7514-201ENSMUST00000209475 934 ntBASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm5874-201ENSMUST00000096101 508 ntBASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6-7-dv9A0A075B639 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav6-7-dv9A0A075B639 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm6420-201ENSMUST00000193885 723 ntBASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm42642-201ENSMUST00000200683 355 ntBASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Nespas-201ENSMUST00000143738 1083 ntBASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Gm22325-201ENSMUST00000158904 308 ntBASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Grk6-206ENSMUST00000224995 2971 ntBASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav6-7-dv9A0A075B639 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms