Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-2A0A075B638 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-2A0A075B638 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Tgds-204ENSMUST00000228543 1594 ntBASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-2A0A075B638 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav4-2A0A075B638 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav4-2A0A075B638 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-2A0A075B638 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-2A0A075B638 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms