Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13d-1A0A075B606 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13d-1A0A075B606 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13d-1A0A075B606 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Gm20760-201ENSMUST00000179197 648 ntBASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-1A0A075B606 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Trav13d-1A0A075B606 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms