Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.36□□□□□ -1.39
Spg11Q3UHA3 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Ephx2-202ENSMUST00000224698 1985 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm43014-201ENSMUST00000198568 2443 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm22272-201ENSMUST00000104039 134 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm14237-201ENSMUST00000122080 430 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm28952-201ENSMUST00000189285 681 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm19185-201ENSMUST00000196365 643 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm8999-201ENSMUST00000204951 969 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 AC101875.1-201ENSMUST00000222666 2223 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm15560-201ENSMUST00000117107 643 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm23776-201ENSMUST00000158993 325 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Mir6975-201ENSMUST00000184879 61 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm43354-201ENSMUST00000196862 346 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm44768-201ENSMUST00000205719 393 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm18805-201ENSMUST00000206872 655 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm46369-201ENSMUST00000221577 401 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.35□□□□□ -1.39
Spg11Q3UHA3 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm25795-201ENSMUST00000104421 132 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm13811-201ENSMUST00000117800 256 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm25065-201ENSMUST00000177914 132 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm25891-201ENSMUST00000180050 132 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm45705-201ENSMUST00000211831 2134 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm7570-201ENSMUST00000215246 698 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Spg11Q3UHA3 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Spg11Q3UHA3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms