Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm15616-201ENSMUST00000118662 375 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm4911-201ENSMUST00000119388 945 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm5809-201ENSMUST00000121854 529 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm14212-201ENSMUST00000122023 826 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm25660-201ENSMUST00000158470 104 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Mir378d-201ENSMUST00000184232 110 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm29354-201ENSMUST00000187613 696 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm18562-201ENSMUST00000209949 915 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 CT009738.1-201ENSMUST00000219031 809 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.7□□□□□ -1.18
Smc1aQ9CU62 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm25877-201ENSMUST00000104326 129 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm25379-201ENSMUST00000104338 114 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm12653-201ENSMUST00000117778 561 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm12710-201ENSMUST00000119011 216 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm9439-201ENSMUST00000119554 973 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm22795-201ENSMUST00000157233 118 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Mir1930-201ENSMUST00000158799 84 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Mir6357-201ENSMUST00000184246 104 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm36991-201ENSMUST00000191800 648 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm7285-201ENSMUST00000198801 580 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm38840-201ENSMUST00000204716 843 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm44971-201ENSMUST00000206192 337 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm44856-201ENSMUST00000206639 304 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gm5080-201ENSMUST00000220341 743 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 CT030238.3-201ENSMUST00000227352 875 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC7.69□□□□□ -1.18
Smc1aQ9CU62 AC138765.2-202ENSMUST00000228418 3435 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm13798-201ENSMUST00000118285 139 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm5255-201ENSMUST00000120125 642 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms