Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090957.1-201ENST00000422657 1147 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC079779.2-202ENST00000427831 392 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 RPL13P5-204ENST00000441655 618 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC073321.1-201ENST00000441803 654 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL008718.1-201ENST00000445867 487 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC092159.1-202ENST00000456255 389 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 LINC02031-201ENST00000492416 592 ntTSL 4 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC097467.2-201ENST00000502884 346 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 OR7E86P-201ENST00000505858 990 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 LINC02056-203ENST00000512573 594 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC026780.1-202ENST00000513812 572 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC112249.1-201ENST00000513916 436 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 IGKV2OR22-3-201ENST00000521969 360 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 LINC02409-201ENST00000547515 576 ntTSL 4 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL137191.1-201ENST00000554921 814 ntTSL 2 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 LINC02189-201ENST00000563331 506 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ARHGAP23P1-202ENST00000567025 423 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC007795.1-201ENST00000585883 437 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC006504.5-205ENST00000588318 432 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 ZNF429-206ENST00000597078 1043 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 CXCL17-202ENST00000601181 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 GAGE1-203ENST00000610680 564 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 MIR6511A2-201ENST00000611011 67 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 MIR6511A3-201ENST00000615389 67 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 MIR6511A4-201ENST00000615860 67 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL121890.4-201ENST00000616569 609 ntTSL 3 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 MIR6511A1-201ENST00000617664 67 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 GPR156-203ENST00000464295 4442 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 AL645730.1-201ENST00000622945 1901 ntBASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 UQCRC2-201ENST00000268379 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NPIPA3F8WFD2 CAP1-202ENST00000372792 1496 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 LINC01847-203ENST00000641163 1490 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 ATP6V1C2-202ENST00000381661 3102 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 BNIPL-203ENST00000368931 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 TCN2-201ENST00000215838 2535 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 FCGR2B-201ENST00000236937 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 C8A-201ENST00000361249 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 OR4K14-201ENST00000305045 933 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 OR10G9-201ENST00000375024 936 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 ANKRD30BL-202ENST00000409867 1251 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 RN7SKP150-201ENST00000410516 321 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 RN7SKP68-201ENST00000411055 307 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 LINC01703-201ENST00000412855 423 ntTSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 TCEAL4-202ENST00000415568 959 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 DCTN1-AS1-202ENST00000416630 584 ntTSL 4 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 CYP3A43-206ENST00000417625 1255 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 VNN3-206ENST00000423615 1021 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AC000081.1-201ENST00000433141 297 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 MYCNUT-201ENST00000433810 1039 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 NDUFA9P1-201ENST00000436210 1135 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 MID1IP1-AS1-201ENST00000436893 376 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 TMEM256P2-201ENST00000440241 341 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 TGFA-IT1-201ENST00000441238 436 ntTSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 GFOD1-AS1-201ENST00000446001 332 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL161785.1-201ENST00000455981 583 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 RN7SL417P-201ENST00000459938 265 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 C6orf52-204ENST00000460742 541 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 DMKN-219ENST00000461300 567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 RN7SL310P-201ENST00000465317 281 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AC104212.1-201ENST00000472088 613 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL133368.1-201ENST00000486273 814 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 PTPN20-214ENST00000503851 545 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL356235.1-202ENST00000506043 337 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 PTPN20-220ENST00000508715 586 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 PTPN20-227ENST00000513159 450 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AC004066.2-201ENST00000514879 572 ntTSL 4 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 COMMD9-206ENST00000532705 881 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 BCO1-203ENST00000564552 949 ntTSL 2 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AC138627.1-208ENST00000568137 966 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL354733.2-207ENST00000586206 757 ntTSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AP001029.2-201ENST00000586591 361 ntTSL 3 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 LINC00868-201ENST00000589708 547 ntTSL 3 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 AL627309.8-201ENST00000595919 284 ntBASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
NPIPA3F8WFD2 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 274.2 ms