Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm13702-201ENSMUST00000118542 825 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm14375-201ENSMUST00000119490 855 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm13642-201ENSMUST00000121697 381 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC7.72□□□□□ -1.17
Col2a1P28481 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm10410-201ENSMUST00000180138 384 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm26898-201ENSMUST00000181678 384 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm29197-201ENSMUST00000185922 702 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm37135-201ENSMUST00000192652 534 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm412-201ENSMUST00000193360 948 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm43116-201ENSMUST00000199789 195 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 Gm17918-201ENSMUST00000205315 574 ntBASIC7.72□□□□□ -1.17
Col2a1P28481 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col2a1P28481 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col2a1P28481 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.72□□□□□ -1.17
Col2a1P28481 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col2a1P28481 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.71□□□□□ -1.17
Col2a1P28481 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Col2a1P28481 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.71□□□□□ -1.17
Col2a1P28481 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.71□□□□□ -1.17
Col2a1P28481 Grik1-210ENSMUST00000228034 2708 ntBASIC7.71□□□□□ -1.17
Col2a1P28481 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.71□□□□□ -1.17
Col2a1P28481 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
Col2a1P28481 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col2a1P28481 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm25346-201ENSMUST00000104509 128 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm11462-201ENSMUST00000117749 562 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm9506-201ENSMUST00000118516 320 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm11879-201ENSMUST00000121885 702 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.71□□□□□ -1.18
Col2a1P28481 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm9027-201ENSMUST00000165914 661 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm18700-201ENSMUST00000185791 553 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm18600-201ENSMUST00000207205 505 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Gm46364-201ENSMUST00000218548 319 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Olfr687-201ENSMUST00000098154 938 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 CT009480.2-201ENSMUST00000225152 3369 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Col2a1P28481 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.71□□□□□ -1.18
Col2a1P28481 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col2a1P28481 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Col2a1P28481 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.7□□□□□ -1.18
Col2a1P28481 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Col2a1P28481 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.7□□□□□ -1.18
Col2a1P28481 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms