Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HmgclP38060 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
HmgclP38060 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
HmgclP38060 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
HmgclP38060 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC6.77□□□□□ -1.32
HmgclP38060 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
HmgclP38060 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
HmgclP38060 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.77□□□□□ -1.33
HmgclP38060 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
HmgclP38060 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm5319-201ENSMUST00000118965 873 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Gm22728-201ENSMUST00000158087 129 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm25717-201ENSMUST00000158631 353 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm26025-201ENSMUST00000158655 271 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Gm27001-201ENSMUST00000182252 936 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
HmgclP38060 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.77□□□□□ -1.33
HmgclP38060 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Gm9114-201ENSMUST00000188558 997 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm9419-201ENSMUST00000200672 567 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Gm9357-201ENSMUST00000207138 805 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.77□□□□□ -1.33
HmgclP38060 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
HmgclP38060 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
HmgclP38060 AW822073-201ENSMUST00000075305 555 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Mir296-201ENSMUST00000083587 79 ntBASIC6.77□□□□□ -1.33
HmgclP38060 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.77□□□□□ -1.33
HmgclP38060 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
HmgclP38060 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
HmgclP38060 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
HmgclP38060 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HmgclP38060 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HmgclP38060 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
HmgclP38060 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm15310-201ENSMUST00000117891 372 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Gm11517-201ENSMUST00000119491 387 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.76□□□□□ -1.33
HmgclP38060 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm23031-201ENSMUST00000157998 119 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HmgclP38060 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HmgclP38060 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.76□□□□□ -1.33
HmgclP38060 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm3841-201ENSMUST00000191399 451 ntBASIC6.76□□□□□ -1.33
HmgclP38060 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.76□□□□□ -1.33
HmgclP38060 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 Gm44112-201ENSMUST00000204787 372 ntBASIC6.76□□□□□ -1.33
HmgclP38060 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.76□□□□□ -1.33
HmgclP38060 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.76□□□□□ -1.33
HmgclP38060 Gm18914-201ENSMUST00000214625 616 ntBASIC6.76□□□□□ -1.33
HmgclP38060 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HmgclP38060 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms