Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Trim47Q8C0E3 Gm37978-201ENSMUST00000194736 2915 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 AC154828.1-201ENSMUST00000220696 2810 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Dennd6a-205ENSMUST00000224378 2424 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Mir582-201ENSMUST00000103758 81 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm7803-201ENSMUST00000117176 1015 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm15766-201ENSMUST00000118025 813 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm13552-201ENSMUST00000118837 417 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm14485-201ENSMUST00000119489 493 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm4725-201ENSMUST00000151048 587 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm25432-201ENSMUST00000158284 66 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Traj54-201ENSMUST00000165071 54 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm23145-201ENSMUST00000178912 79 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm6100-201ENSMUST00000180253 403 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm27680-202ENSMUST00000199221 807 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm4374-201ENSMUST00000204929 424 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm45673-201ENSMUST00000210293 358 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm24696-201ENSMUST00000083878 134 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 AC166159.1-201ENSMUST00000227154 1380 ntBASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Trim47Q8C0E3 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Trim2-202ENSMUST00000065380 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Vmn1r40-202ENSMUST00000226925 3011 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm22927-201ENSMUST00000104268 131 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm22022-201ENSMUST00000104355 127 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm13858-201ENSMUST00000118862 671 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 n-R5s30-201ENSMUST00000122624 122 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm12126-201ENSMUST00000147717 619 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm23852-201ENSMUST00000158376 77 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm24050-201ENSMUST00000158623 290 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm24738-201ENSMUST00000158856 123 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm5473-201ENSMUST00000179326 642 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Mir6340-201ENSMUST00000183857 119 ntBASIC8.69□□□□□ -1.02
Trim47Q8C0E3 Gm27236-201ENSMUST00000184147 442 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms