Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm42883-201ENSMUST00000202594 222 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Gm2398-201ENSMUST00000218347 883 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Brf1Q8CFK2 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Malat1-201ENSMUST00000172812 6983 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm14729-201ENSMUST00000118373 689 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm16138-201ENSMUST00000159341 821 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Mir8120-201ENSMUST00000185035 139 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm29357-201ENSMUST00000186877 698 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm29470-201ENSMUST00000188007 696 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm5080-201ENSMUST00000220341 743 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Brf1Q8CFK2 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.34□□□□□ -1.08
Brf1Q8CFK2 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm13137-201ENSMUST00000118035 345 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm15153-201ENSMUST00000119867 274 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm9167-201ENSMUST00000182469 962 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Mir7005-201ENSMUST00000185089 69 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm28801-201ENSMUST00000188761 449 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm28428-201ENSMUST00000188886 697 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm29496-201ENSMUST00000189854 693 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm42782-201ENSMUST00000197286 522 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm45177-201ENSMUST00000209104 2307 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC8.33□□□□□ -1.08
Brf1Q8CFK2 AC155834.1-201ENSMUST00000220033 498 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 AC106830.1-201ENSMUST00000228032 1003 ntBASIC8.33□□□□□ -1.08
Brf1Q8CFK2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms