Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH12Q9NPG4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 CROCCP5-201ENST00000436658 830 ntBASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 AC231657.2-201ENST00000624556 255 ntBASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDH12Q9NPG4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 AC007322.1-201ENST00000426983 750 ntBASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 CNN2P6-201ENST00000439038 900 ntBASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 TERF1P5-201ENST00000477545 1207 ntBASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 PKD1P6-201ENST00000343738 4769 ntBASIC21.04■□□□□ 0.96
PCDH12Q9NPG4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH12Q9NPG4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 MIR663A-201ENST00000385250 93 ntBASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 AC006970.2-201ENST00000450065 779 ntBASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH12Q9NPG4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDH12Q9NPG4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 AC013268.1-206ENST00000638368 961 ntBASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 AC112229.1-201ENST00000639295 961 ntBASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH12Q9NPG4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
PCDH12Q9NPG4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms