Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sec61a2Q9JLR1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sec61a2Q9JLR1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sec61a2Q9JLR1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Gm7291-201ENSMUST00000199147 382 ntBASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sec61a2Q9JLR1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Gm27405-201ENSMUST00000184201 112 ntBASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sec61a2Q9JLR1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Sec61a2Q9JLR1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sec61a2Q9JLR1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sec61a2Q9JLR1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sec61a2Q9JLR1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms