Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim39Q9ESN2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim39Q9ESN2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim39Q9ESN2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trim39Q9ESN2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim39Q9ESN2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim39Q9ESN2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Gm7860-201ENSMUST00000121190 879 ntBASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim39Q9ESN2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Fst-202ENSMUST00000223640 2612 ntBASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim39Q9ESN2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim39Q9ESN2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim39Q9ESN2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim39Q9ESN2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim39Q9ESN2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Trim39Q9ESN2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim39Q9ESN2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms