Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf6Q9DBU5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf6Q9DBU5 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Gm6211-202ENSMUST00000167849 925 ntBASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf6Q9DBU5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Rnf6Q9DBU5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf6Q9DBU5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf6Q9DBU5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf6Q9DBU5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rnf6Q9DBU5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf6Q9DBU5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Gm37179-201ENSMUST00000194862 823 ntBASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf6Q9DBU5 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf6Q9DBU5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms