Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Gm7514-201ENSMUST00000209475 934 ntBASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Gm10033-202ENSMUST00000211874 928 ntBASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtl8cQ9D6I0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtl8cQ9D6I0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtl8cQ9D6I0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtl8cQ9D6I0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Gm22325-201ENSMUST00000158904 308 ntBASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtl8cQ9D6I0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 AV356131-201ENSMUST00000206201 750 ntBASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtl8cQ9D6I0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Gm18284-201ENSMUST00000172604 624 ntBASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rtl8cQ9D6I0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms