Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Upk1aQ9D132 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.39■□□□□ 0.37
Upk1aQ9D132 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.39■□□□□ 0.37
Upk1aQ9D132 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.39■□□□□ 0.37
Upk1aQ9D132 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Gm43173-201ENSMUST00000202246 593 ntBASIC17.39■□□□□ 0.37
Upk1aQ9D132 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Tgds-204ENSMUST00000228543 1594 ntBASIC17.39■□□□□ 0.37
Upk1aQ9D132 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.39■□□□□ 0.37
Upk1aQ9D132 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Upk1aQ9D132 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Gm8969-201ENSMUST00000199694 526 ntBASIC17.38■□□□□ 0.37
Upk1aQ9D132 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.38■□□□□ 0.37
Upk1aQ9D132 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Upk1aQ9D132 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.37■□□□□ 0.37
Upk1aQ9D132 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.37■□□□□ 0.37
Upk1aQ9D132 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.37■□□□□ 0.37
Upk1aQ9D132 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Upk1aQ9D132 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Gm11421-201ENSMUST00000122124 294 ntBASIC17.36■□□□□ 0.37
Upk1aQ9D132 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Upk1aQ9D132 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Gm8493-201ENSMUST00000196881 489 ntBASIC17.35■□□□□ 0.37
Upk1aQ9D132 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Upk1aQ9D132 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.35■□□□□ 0.37
Upk1aQ9D132 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Upk1aQ9D132 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1aQ9D132 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Upk1aQ9D132 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.33■□□□□ 0.36
Upk1aQ9D132 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Gm27801-201ENSMUST00000184174 223 ntBASIC17.33■□□□□ 0.36
Upk1aQ9D132 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.33■□□□□ 0.36
Upk1aQ9D132 Gm27454-201ENSMUST00000185090 204 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms