Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trim13Q9CYB0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim13Q9CYB0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim13Q9CYB0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.9■□□□□ 0.3
Trim13Q9CYB0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Trim13Q9CYB0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trim13Q9CYB0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim13Q9CYB0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim13Q9CYB0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim13Q9CYB0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Gm13241-201ENSMUST00000094493 780 ntBASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim13Q9CYB0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trim13Q9CYB0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms