Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.86■□□□□ 0.45
Trim16Q99PP9 AV356131-201ENSMUST00000206201 750 ntBASIC17.86■□□□□ 0.45
Trim16Q99PP9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.86■□□□□ 0.45
Trim16Q99PP9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim16Q99PP9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim16Q99PP9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim16Q99PP9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Trim16Q99PP9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim16Q99PP9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
Trim16Q99PP9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim16Q99PP9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim16Q99PP9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Gm13534-201ENSMUST00000121169 513 ntBASIC17.82■□□□□ 0.44
Trim16Q99PP9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.82■□□□□ 0.44
Trim16Q99PP9 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.82■□□□□ 0.44
Trim16Q99PP9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim16Q99PP9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim16Q99PP9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms