Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tlr3Q99MB1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tlr3Q99MB1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tlr3Q99MB1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tlr3Q99MB1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tlr3Q99MB1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Tlr3Q99MB1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
Tlr3Q99MB1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Gm7290-201ENSMUST00000104990 617 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Gm12918-201ENSMUST00000120234 636 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Gm15710-201ENSMUST00000121821 636 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Gm5075-201ENSMUST00000196916 622 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tlr3Q99MB1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tlr3Q99MB1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Tlr3Q99MB1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tlr3Q99MB1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms