Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Gm10698-201ENSMUST00000182663 604 ntBASIC21.03■□□□□ 0.96
Smc1bQ920F6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.02■□□□□ 0.96
Smc1bQ920F6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.02■□□□□ 0.96
Smc1bQ920F6 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.02■□□□□ 0.96
Smc1bQ920F6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smc1bQ920F6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smc1bQ920F6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Smc1bQ920F6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Smc1bQ920F6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.01■□□□□ 0.95
Smc1bQ920F6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
Smc1bQ920F6 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.01■□□□□ 0.95
Smc1bQ920F6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Smc1bQ920F6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21■□□□□ 0.95
Smc1bQ920F6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Smc1bQ920F6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smc1bQ920F6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smc1bQ920F6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smc1bQ920F6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.99■□□□□ 0.95
Smc1bQ920F6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Mir1199-201ENSMUST00000117015 119 ntBASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gm11249-201ENSMUST00000117071 859 ntBASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gm15378-201ENSMUST00000121894 207 ntBASIC20.99■□□□□ 0.95
Smc1bQ920F6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gm9987-201ENSMUST00000069768 567 ntBASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smc1bQ920F6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smc1bQ920F6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms