Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhgb4Q91XX6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhgb4Q91XX6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhgb4Q91XX6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Gm7514-201ENSMUST00000209475 934 ntBASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Gm18671-201ENSMUST00000214826 683 ntBASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhgb4Q91XX6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhgb4Q91XX6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhgb4Q91XX6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhgb4Q91XX6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Gm26571-201ENSMUST00000181399 666 ntBASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb4Q91XX6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms