Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TraipQ8VIG6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Mtag2-201ENSMUST00000058665 714 ntBASIC19.51■□□□□ 0.71
TraipQ8VIG6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.51■□□□□ 0.71
TraipQ8VIG6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TraipQ8VIG6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Gm715-201ENSMUST00000117865 831 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 BC021767-201ENSMUST00000126387 1716 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TraipQ8VIG6 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.5■□□□□ 0.71
TraipQ8VIG6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.49■□□□□ 0.71
TraipQ8VIG6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TraipQ8VIG6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.47■□□□□ 0.71
TraipQ8VIG6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.47■□□□□ 0.71
TraipQ8VIG6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TraipQ8VIG6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Gm18025-201ENSMUST00000221733 862 ntBASIC19.46■□□□□ 0.71
TraipQ8VIG6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TraipQ8VIG6 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Mir6982-201ENSMUST00000184354 68 ntBASIC19.45■□□□□ 0.7
TraipQ8VIG6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms