Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Slc6a20aQ8VDB9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Slc6a20aQ8VDB9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Slc6a20aQ8VDB9 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Slc6a20aQ8VDB9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.06■□□□□ 0.48
Slc6a20aQ8VDB9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Slc6a20aQ8VDB9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 AV356131-201ENSMUST00000206201 750 ntBASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.04■□□□□ 0.48
Slc6a20aQ8VDB9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Fst-202ENSMUST00000223640 2612 ntBASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Slc6a20aQ8VDB9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms