Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ndc1Q8VCB1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ndc1Q8VCB1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc1Q8VCB1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc1Q8VCB1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ndc1Q8VCB1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ndc1Q8VCB1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ndc1Q8VCB1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ndc1Q8VCB1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ndc1Q8VCB1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ndc1Q8VCB1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Gm44549-201ENSMUST00000208351 577 ntBASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ndc1Q8VCB1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ndc1Q8VCB1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ndc1Q8VCB1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms