Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.47■□□□□ 0.71
Rd3Q8BRE0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rd3Q8BRE0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rd3Q8BRE0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rd3Q8BRE0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Rd3Q8BRE0 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.42■□□□□ 0.7
Rd3Q8BRE0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rd3Q8BRE0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rd3Q8BRE0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rd3Q8BRE0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rd3Q8BRE0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rd3Q8BRE0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rd3Q8BRE0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms