Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sh3d21Q7TSG5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sh3d21Q7TSG5 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Sh3d21Q7TSG5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Sh3d21Q7TSG5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sh3d21Q7TSG5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Sh3d21Q7TSG5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Gm27405-201ENSMUST00000184201 112 ntBASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3d21Q7TSG5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3d21Q7TSG5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Sh3d21Q7TSG5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3d21Q7TSG5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3d21Q7TSG5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3d21Q7TSG5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3d21Q7TSG5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Gm7291-201ENSMUST00000199147 382 ntBASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3d21Q7TSG5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms