Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim37Q6PCX9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim37Q6PCX9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Dio3-201ENSMUST00000097228 1449 ntBASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Gm18666-201ENSMUST00000190039 958 ntBASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim37Q6PCX9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Gm43799-201ENSMUST00000201845 579 ntBASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Gm7367-201ENSMUST00000057611 492 ntBASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.28■□□□□ 0.84
Trim37Q6PCX9 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Gm11249-201ENSMUST00000117071 859 ntBASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Gm6433-201ENSMUST00000118634 875 ntBASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Gm27741-201ENSMUST00000185060 237 ntBASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim37Q6PCX9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim37Q6PCX9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim37Q6PCX9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim37Q6PCX9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Gm15378-201ENSMUST00000121894 207 ntBASIC20.25■□□□□ 0.83
Trim37Q6PCX9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim37Q6PCX9 BC021767-201ENSMUST00000126387 1716 ntBASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim37Q6PCX9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms