Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm8587-201ENSMUST00000076538 843 ntBASIC17.34■□□□□ 0.37
VcanQ62059 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VcanQ62059 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VcanQ62059 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VcanQ62059 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VcanQ62059 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
VcanQ62059 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Gm34391-201ENSMUST00000203706 907 ntBASIC17.33■□□□□ 0.36
VcanQ62059 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.33■□□□□ 0.36
VcanQ62059 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VcanQ62059 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.32■□□□□ 0.36
VcanQ62059 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
VcanQ62059 Gm12382-201ENSMUST00000122005 922 ntBASIC17.32■□□□□ 0.36
VcanQ62059 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VcanQ62059 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 Gm25016-201ENSMUST00000158399 131 ntBASIC17.32■□□□□ 0.36
VcanQ62059 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VcanQ62059 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VcanQ62059 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
VcanQ62059 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Gm6623-201ENSMUST00000173570 544 ntBASIC17.31■□□□□ 0.36
VcanQ62059 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.31■□□□□ 0.36
VcanQ62059 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.31■□□□□ 0.36
VcanQ62059 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.31■□□□□ 0.36
VcanQ62059 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VcanQ62059 Gm37935-201ENSMUST00000192012 982 ntBASIC17.31■□□□□ 0.36
VcanQ62059 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
VcanQ62059 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.3■□□□□ 0.36
VcanQ62059 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
VcanQ62059 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.3■□□□□ 0.36
VcanQ62059 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VcanQ62059 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.3■□□□□ 0.36
VcanQ62059 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VcanQ62059 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
VcanQ62059 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VcanQ62059 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.29■□□□□ 0.36
VcanQ62059 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VcanQ62059 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.29■□□□□ 0.36
VcanQ62059 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VcanQ62059 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VcanQ62059 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.28■□□□□ 0.36
VcanQ62059 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.28■□□□□ 0.36
VcanQ62059 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.28■□□□□ 0.36
VcanQ62059 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.28■□□□□ 0.36
VcanQ62059 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.28■□□□□ 0.36
VcanQ62059 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VcanQ62059 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VcanQ62059 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Gm11927-201ENSMUST00000118472 759 ntBASIC17.27■□□□□ 0.36
VcanQ62059 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
VcanQ62059 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
VcanQ62059 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
VcanQ62059 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VcanQ62059 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VcanQ62059 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VcanQ62059 Gm37292-201ENSMUST00000192062 758 ntBASIC17.27■□□□□ 0.35
VcanQ62059 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.27■□□□□ 0.35
VcanQ62059 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VcanQ62059 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VcanQ62059 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
VcanQ62059 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VcanQ62059 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VcanQ62059 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms