Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc42Q5SV66 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Ccdc42Q5SV66 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc42Q5SV66 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc42Q5SV66 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc42Q5SV66 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ccdc42Q5SV66 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.76■□□□□ 0.75
Ccdc42Q5SV66 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc42Q5SV66 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc42Q5SV66 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gm8493-201ENSMUST00000196881 489 ntBASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gm13241-201ENSMUST00000094493 780 ntBASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc42Q5SV66 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Gm43173-201ENSMUST00000202246 593 ntBASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc42Q5SV66 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms