Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav7d-4Q5R1H9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav7d-4Q5R1H9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Gm8969-201ENSMUST00000199694 526 ntBASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Gm40881-201ENSMUST00000223397 166 ntBASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Serp2-204ENSMUST00000228055 705 ntBASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav7d-4Q5R1H9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav7d-4Q5R1H9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-4Q5R1H9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-4Q5R1H9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-4Q5R1H9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav7d-4Q5R1H9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms