Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Spcs1-204ENSMUST00000226782 949 ntBASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav8d-1Q5R1H8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav8d-1Q5R1H8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav8d-1Q5R1H8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Gm6139-201ENSMUST00000079261 882 ntBASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8d-1Q5R1H8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8d-1Q5R1H8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8d-1Q5R1H8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms