Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm7860-201ENSMUST00000121190 879 ntBASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm15546-201ENSMUST00000122095 826 ntBASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Golgb1-201ENSMUST00000023534 498 ntBASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm5812-201ENSMUST00000061073 957 ntBASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm9959-201ENSMUST00000068277 390 ntBASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Fst-202ENSMUST00000223640 2612 ntBASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav15-1-dv6-1Q5R1D2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms