Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim80Q3V061 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trim80Q3V061 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.9■□□□□ 0.62
Trim80Q3V061 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim80Q3V061 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim80Q3V061 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Trim80Q3V061 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim80Q3V061 Gm10849-201ENSMUST00000100397 618 ntBASIC18.89■□□□□ 0.61
Trim80Q3V061 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.89■□□□□ 0.61
Trim80Q3V061 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.89■□□□□ 0.61
Trim80Q3V061 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.89■□□□□ 0.61
Trim80Q3V061 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim80Q3V061 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim80Q3V061 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim80Q3V061 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.88■□□□□ 0.61
Trim80Q3V061 Gm42642-201ENSMUST00000200683 355 ntBASIC18.88■□□□□ 0.61
Trim80Q3V061 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim80Q3V061 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.88■□□□□ 0.61
Trim80Q3V061 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim80Q3V061 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim80Q3V061 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Trim80Q3V061 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim80Q3V061 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim80Q3V061 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim80Q3V061 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim80Q3V061 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim80Q3V061 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim80Q3V061 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim80Q3V061 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Trim80Q3V061 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trim80Q3V061 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Trim80Q3V061 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.86■□□□□ 0.61
Trim80Q3V061 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Trim80Q3V061 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim80Q3V061 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Trim80Q3V061 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim80Q3V061 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.85■□□□□ 0.61
Trim80Q3V061 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Gm26571-201ENSMUST00000181399 666 ntBASIC18.85■□□□□ 0.61
Trim80Q3V061 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim80Q3V061 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.85■□□□□ 0.61
Trim80Q3V061 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim80Q3V061 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim80Q3V061 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.84■□□□□ 0.61
Trim80Q3V061 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim80Q3V061 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.84■□□□□ 0.61
Trim80Q3V061 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Trim80Q3V061 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim80Q3V061 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim80Q3V061 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim80Q3V061 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim80Q3V061 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim80Q3V061 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms