Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.9■□□□□ 0.78
CiitaP79621 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.9■□□□□ 0.78
CiitaP79621 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CiitaP79621 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CiitaP79621 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CiitaP79621 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.89■□□□□ 0.77
CiitaP79621 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Iqck-206ENSMUST00000208658 2891 ntBASIC19.89■□□□□ 0.77
CiitaP79621 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.89■□□□□ 0.77
CiitaP79621 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
CiitaP79621 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CiitaP79621 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CiitaP79621 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CiitaP79621 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CiitaP79621 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CiitaP79621 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.88■□□□□ 0.77
CiitaP79621 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.88■□□□□ 0.77
CiitaP79621 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CiitaP79621 Gm18666-201ENSMUST00000190039 958 ntBASIC19.88■□□□□ 0.77
CiitaP79621 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.88■□□□□ 0.77
CiitaP79621 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CiitaP79621 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CiitaP79621 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.87■□□□□ 0.77
CiitaP79621 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CiitaP79621 Gm13158-201ENSMUST00000122007 736 ntBASIC19.87■□□□□ 0.77
CiitaP79621 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Gm38285-201ENSMUST00000192928 922 ntBASIC19.87■□□□□ 0.77
CiitaP79621 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CiitaP79621 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CiitaP79621 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CiitaP79621 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CiitaP79621 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CiitaP79621 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.86■□□□□ 0.77
CiitaP79621 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.86■□□□□ 0.77
CiitaP79621 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CiitaP79621 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.86■□□□□ 0.77
CiitaP79621 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CiitaP79621 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CiitaP79621 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.85■□□□□ 0.77
CiitaP79621 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CiitaP79621 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CiitaP79621 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CiitaP79621 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.85■□□□□ 0.77
CiitaP79621 Gm10698-201ENSMUST00000182663 604 ntBASIC19.85■□□□□ 0.77
CiitaP79621 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.85■□□□□ 0.77
CiitaP79621 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.85■□□□□ 0.77
CiitaP79621 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.85■□□□□ 0.77
CiitaP79621 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CiitaP79621 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CiitaP79621 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CiitaP79621 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CiitaP79621 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.84■□□□□ 0.77
CiitaP79621 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.84■□□□□ 0.77
CiitaP79621 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.84■□□□□ 0.77
CiitaP79621 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CiitaP79621 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CiitaP79621 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CiitaP79621 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CiitaP79621 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CiitaP79621 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CiitaP79621 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CiitaP79621 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.83■□□□□ 0.77
CiitaP79621 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.83■□□□□ 0.77
CiitaP79621 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.83■□□□□ 0.77
CiitaP79621 Gm10812-201ENSMUST00000099864 546 ntBASIC19.83■□□□□ 0.77
CiitaP79621 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CiitaP79621 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CiitaP79621 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CiitaP79621 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CiitaP79621 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CiitaP79621 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms